• Vannoy, T.C.; Sweeney, N.B.; Shaw, J.A.; Whitaker, B.M. Comparison of Supervised Learning and Changepoint Detection for Insect Detection in Lidar Data. Remote Sens.2023, 15, 5634. https://doi.org/10.3390/rs15245634

  • Burman N, Belukhina S, Depardieu F, Wilkinson RA, Skutel M, Santiago-Frangos A, Graham AB, Livenskyi A, Chechenina A, Morozova N, Zahl T, Henriques WS, Buyukyoruk M, Rouillon C, Saudemont B, Shyrokova L, Kurata T, Hauryliuk V, Severinov K, Groseille J, Thierry A, Koszul R, Tesson F, Bernheim A, Bikard D, Wiedenheft B, Isaev A. A virally encoded tRNA neutralizes the PARIS antiviral defence system. Nature. 2024 Oct;634(8033):424-431. doi: 10.1038/s41586-024-07874-3. Epub 2024 Aug 7. Erratum in: Nature. 2024 Dec;636(8043):E8. doi: 10.1038/s41586-024-08427-4. PMID: 39111359; PMCID: PMC11464382.
  • Tang, S., Žedaveinytė, R., Burman, N. et al. Protein-primed homopolymer synthesis by an antiviral reverse transcriptase. Nature (2025). https://doi.org/10.1038/s41586-025-09179-5
  • Y Abdulghani, A M Lohfink, J Chauhan, A new independent look at the Galactic black hole low-mass X-ray binary distribution, Monthly Notices of the Royal Astronomical Society, Volume 541, Issue 1, July 2025, Pages 553–572, https://doi.org/10.1093/mnras/staf979
  • Christensen, B., Legendre, D., Owkes, M., (Submitted) Numerical Study on Newtonian and Non-Newtonian Droplet Aerobreakup Mechanisms'', Journal of Fluid Mechanics
  • Christensen, B., Van Poppel, B., Owkes, M., (Submitted) A Computational Framework for Simulating and Analyzing Atomization in Electrically Charged Diesel-type Jets'', International
    Journal of Multiphase Flows
  • Owkes, M., Homan, T., Benson, M., Banko, A., (2025) High Fidelity Simulations of Contaminant Dispersion in Urban Environment with Comparison with Magnetic Resonance
    Measurements'', Environmental Fluid Mechanics 25, 5 https://doi.org/10.1007/s10652-025-10019-3
  • Krisshna, V., Owkes, M., (2024) Investigating atomization characteristics in an electrostatic rotary bell atomizer'', International Journal of Multiphase Flows, 175 (104814)
    https://doi.org/10.1016/j.ijmultiphaseflow.2024.104814
  • Dacunto, P., Nam, S., Hirn, M., Rodriguez, A., Owkes, M., Benson, M., (2023) “Classroom aerosol dispersion modeling: experimental assessment of a low-cost flow simulation tool”,
    Environmental Science: Processes \& Impacts, 25: 2157-2166 https://doi.org/10.1039/d3em00356f
  • Stewart, P. S., Owkes, M., (2023) Simulation of Catalase-Dependent Tolerance of Microbial Biofilm to Hydrogen Peroxide with a Biofilm Computer Model'', npj Biofilms and
    Microbiomes, 9 (60) https://doi.org/10.1038/s41522-023-00426-z
  • Krisshna, V., Liu, W., Owkes, M., (2023) High-fidelity simulations of a rotary bell atomizer with electrohydrodynamic effects'', International Journal of Multiphase Flows, 168 (104566)
    https://doi.org/10.1016/j.ijmultiphaseflow.2023.104566
  • Christensen, B., Owkes, M., (2023) Efficient Extraction of Atomization Processes from High-Fidelity Simulations'', Computers and Fluids, 254 (105808)
    https://doi.org/10.1016/j.compfluid.2023.105808
  • Pierce, C., Gerekos, C., Skidmore, M., Beem, L., Blankenship, D., Lee, W. S., Adams, E., Lee, C.-K., & Stutz, J. (2024). Characterizing sub-glacial hydrology using radar simulations. The
    Cryosphere, 18(4), 1495–1515. https://doi.org/10.5194/tc-18-1495-2024
  • Pierce, C., Skidmore, M., Beem, L., Blankenship, D., Adams, E., & Gerekos, C. (2024). Exploring canyons beneath Devon Ice Cap for sub-glacial drainage using radar and thermodynamic
    modeling. Journal of Glaciology, 1–18. https://doi.org/10.1017/jog.2024.49
  • Yu, Hang, and Fei Dai. "Are WASP-107-like Systems Consistent with High-eccentricity Migration?." The Astrophysical Journal 972.2 (2024): 159.
  • Wang, H., Clark, J., McKelvey, H., Sterman, L., Zheng, G., Tian, Z., & Liu, X. (2025). Improving scholarship accessibility with reinforcement learning. Information Research an International
    Electronic Journal, 30(iConf), 203–218. https://doi.org/10.47989/ir30iConf47530
  • Wang, H., & Clark, J. (2024). Simplifying scholarly abstracts for accessible digital libraries using language models. In The 2024 ACM/IEEE Joint Conference on Digital Libraries (JCDL
    '24). https://doi.org/10.1145/3677389.3702490
  • Wang, H., Clark, J., McKelvey, H., Sterman, L., Zheng, G., Tian, Z., & Liu, X. (2025). Improving scholarship accessibility with reinforcement learning. Information Research an International
    Electronic Journal, 30(iConf), 203–218. https://doi.org/10.47989/ir30iConf47530
  • Ren, R., Yao, X., Cole, S., & Wang, H. (2024). Are Large Language Models Ready for Travel Planning?. arXiv preprint arXiv:2410.17333. https://arxiv.org/abs/2410.17333
  • Reynolds GL, Mumey B, Strnadova-Neeley V, Lachowiec J. 2024, Hijacking a metagenomics approach for polyploid comparative genomics. Applications in Plant Science.
    https://doi.org/10.1002/aps3.11581
  • Williams JL, Killian EZ, Halpin-McCormick A, Kantar MB, Ewing PM, Sherman JD, Eberly JO, Lachowiec J*. 2024. Uncovering genetic linkages in the rhizosphere contributing to
    adaptation. bioRxiv preprint. https://doi.org/10.1101/2024.11.21.624704
  • Killian E, Eberly JO, Lachowiec J. Utilizing QGIS for Open-Source UAS Imagery Plant Classification and Plot Segmentation. Authorea Preprints. 2025 Jan 7.
  • Killian E, Lachowiec J, Sherman J, Lutgen G, Eberly J. 2023. High resolution aerial imagery of barley over a growing season. Dryad. Dataset. https://doi.org/10.5061/dryad.bk3j9kdhp
  • Brooks, N., Tuholske, C., McMahon, K, and Andam, K. (In Press). Extreme heat and women’s reproductive health in Nigeria. Proceedings of the National Academy of Sciences.
  • Thalheimer, L., Cottier, F., Kruczkiewicz, A., Hultquist, C., Tuholske, C., Benveniste, H., ... & Horton, R. M. (2025). Prioritizing involuntary immobility in climate policy and disaster planning.
    Nature Communications, 16(1), 2581.
  • UNHCR. (2024). No escape: On the frontlines of climate change, conflict and forced displacement. United Nations High Commissioner for Refugees.
  • Bruce, K, Tsuruta, S., Liebmann A. C., and Teter M. A. (2025) "Spectral Analysis of the 2019 and 2022 Outbursts of SAX J1808.4-3658" [Manuscript submitted for publication] Physics
    Department, Montana State University.
  • EssentCell: Discovering Essential Evolutionary Relations in Noisy Single-Cell Data
    Adiesha Liyanage, Robyn Burger, Allison Shi, Braeden Sopp, Binhai Zhu, Brendan Mumey
    bioRxiv 2025.04.12.648524; doi: https://doi.org/10.1101/2025.04.12.648524
  • How the microbiome liberates iron from heme (2024)
    Arnab Kumar Nath, Ronivaldo Rodrigues da Silva, Colin C. Gauvin, Emmanuel Akpoto, Victoria Adedoyin, Mensur Dlakić, C. Martin Lawrence, Jennifer L. DuBois
    doi: https://doi.org/10.1101/2024.10.14.618232
  • Respiratory processes of early-evolved hyperthermophiles in sulfidic and low-oxygen geothermal microbial communities. Inskeep WP, Jay ZJ, McKay LJ, Dlakić M. Nat Commun. 2025 Jan 2;16(1):277. doi: 10.1038/s41467-024-55079-z. PMID: 39746973
  • Bacteroides thetaiotaomicron, a Model Gastrointestinal Tract Species, Prefers Heme as an Iron Source, Yields Protoporphyrin IX as a Product, and Acts as a Heme Reservoir. Meslé MM, Gray CR, Dlakić M, DuBois JL. Microbiol Spectr. 2023 Mar 2;11(2):e0481522. doi: 10.1128/spectrum.04815-22. PMID: 36862015
  • The Pseudomonas aeruginosa RpoH (σ32) Regulon and Its Role in Essential Cellular Functions, Starvation Survival, and Antibiotic Tolerance. Williamson KS, Dlakić M, Akiyama T, Franklin MJ. Int J Mol Sci. 2023 Jan 12;24(2):1513. doi: 10.3390/ijms24021513. PMID: 36675051
  • Sobolewski TN, Trousdale RC, Gauvin CL, Lawrence CM, Walker RA (2025 Jan 14). Nanomolar PFOA Concentrations Affect Lipid Membrane Structure: Consequences for Bioconcentration Mechanisms. Environmental Science & Technology, 59(1), 709-718 Impact Factor = 10.9
  • Sobolewski TN, Findlay JL, Hemphill JE, Walker RA (2024 Nov 26). Aggregation, Not Micellization: Perfluorooctanoic Acid, Perfluorobutanesulfonic Acid, and Potassium Perfluorooctanesulfonate Behavior in Aqueous Solution. Langmuir, 40(47), 24820-24831. Impact Factor = 3.7
  • Nath, Arnab Kumar; da Silva, Ronivaldo Rodrigues; Gauvin, Colin C; Akpoto, Emmanuel; Adedoyin, Victoria; Dlakić, Mensur; Lawrence, C Martin; DuBois, Jennifer L. (2024 Oct 14) How the microbiome liberates iron from heme. bioRxiv
  • Cummins B., Johnson K., Schneider J.A., Del Vecchio N., Moshiri N., Wertheim J.O., Goyal R., Skaathun B. (2024) Leveraging social networks for identification of people with HIV who are virally unsuppressed. AIDS, 38(2):245-254. https://doi.org/10.1097/QAD.0000000000003767.
  • Vogel B., Cummins B, Laga I. Accounting for correlation and censoring in Bayesian Network Scale-up Method Models. Submitted to Social Networks.
  • E. Wadsworth, J. Brinton, T. C. Vannoy and B. M. Whitaker, "Assessing LWIR and Visual Sensor Modalities for UAV Detection and Tracking," 2024 Intermountain Engineering, Technology and Computing (IETC), Logan, UT, USA, 2024, pp. 141-146, doi: 10.1109/IETC61393.2024.10564431.
  •